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24, chemin de Borde Rouge -Auzeville - CS52627 31326 Castanet Tolosan cedex - France

Last update: May 2021

Menu Logo Principal Institut Agro Rennes-Angers Angers University   IRHS



Teams BIDefI and VALEMA

PhD student - INRAE
  • Contact

42, rue Georges Morel
CS 60057
49071 BEAUCOUZE Cedex

Tel : +33 (0)2 41 22 56 99

Email :

  • Skills and competences

Development environment and good practices :
  -  Versionning
  -  FAIR data
  -  CI/CD
  -  Docker
  -  Linux

Programming languages ​​:
  -  Python 3
  -  Snakemake
  -  Regular expressions
  -  Shell
  -  CSS3 & HTML5
  -  SQL, PL/SQL
  -  PHP
  -  JavaScript (ES5-6, D3.js)
  -  R
  -  Markup Language (LATEX, Markdown, Hugo)
  -  C/C++

Bioinformatics tools (i-ADHoRe, PAML, differential analysis RNA-Seq)
Statistical analysis
Data visualization (d3.js, circos, Python visualization (seaborn, matplotlib, altaïr))

  • Web pages

Research Gate 

  • Publications
    • Tanguy Lallemand, Sebastien Aubourg, Gilles Hunault, Jean-Marc Celton, and Claudine Landès. Evolution of ohnologous chromosomes following Whole Genome Duplication in apple. Journées Ouvertes de Biologie, Informatique et Mathématique. Poster. Sept. 2020.
    • Tanguy Lallemand, Martin Leduc, Claudine Landès, Carène Rizzon, and Emmanuelle Lerat. “An Overview of Duplicated Gene Detection Methods: Why the Duplication Mechanism Has to Be Accounted for in Their Choice”. In: Genes (2020). doi:10.3390/genes11091046.
    • Tanguy Lallemand, Sylvain Gaillard, Sandra Pelletier, Claudine Landès, Sébastien Aubourg, and Julie Bourbeillon. Visualizing metadata change in networks and/or clusters. 2019.
  • CV

See also

The other members of teams BIDefI and VALEMA

Evolution of duplicated genes in Apple

Malus domestica has a recent and well preserved WGD. This massive event makes the apple tree an organism of choice to study duplicate genes.
Read more