Know more

Our use of cookies

Cookies are a set of data stored on a user’s device when the user browses a web site. The data is in a file containing an ID number, the name of the server which deposited it and, in some cases, an expiry date. We use cookies to record information about your visit, language of preference, and other parameters on the site in order to optimise your next visit and make the site even more useful to you.

To improve your experience, we use cookies to store certain browsing information and provide secure navigation, and to collect statistics with a view to improve the site’s features. For a complete list of the cookies we use, download “Ghostery”, a free plug-in for browsers which can detect, and, in some cases, block cookies.

Ghostery is available here for free:

You can also visit the CNIL web site for instructions on how to configure your browser to manage cookie storage on your device.

In the case of third-party advertising cookies, you can also visit the following site:, offered by digital advertising professionals within the European Digital Advertising Alliance (EDAA). From the site, you can deny or accept the cookies used by advertising professionals who are members.

It is also possible to block certain third-party cookies directly via publishers:

Cookie type

Means of blocking

Analytical and performance cookies

Google Analytics

Targeted advertising cookies


The following types of cookies may be used on our websites:

Mandatory cookies

Functional cookies

Social media and advertising cookies

These cookies are needed to ensure the proper functioning of the site and cannot be disabled. They help ensure a secure connection and the basic availability of our website.

These cookies allow us to analyse site use in order to measure and optimise performance. They allow us to store your sign-in information and display the different components of our website in a more coherent way.

These cookies are used by advertising agencies such as Google and by social media sites such as LinkedIn and Facebook. Among other things, they allow pages to be shared on social media, the posting of comments, and the publication (on our site or elsewhere) of ads that reflect your centres of interest.

Our EZPublish content management system (CMS) uses CAS and PHP session cookies and the New Relic cookie for monitoring purposes (IP, response times).

These cookies are deleted at the end of the browsing session (when you log off or close your browser window)

Our EZPublish content management system (CMS) uses the XiTi cookie to measure traffic. Our service provider is AT Internet. This company stores data (IPs, date and time of access, length of the visit and pages viewed) for six months.

Our EZPublish content management system (CMS) does not use this type of cookie.

For more information about the cookies we use, contact INRA’s Data Protection Officer by email at or by post at:

24, chemin de Borde Rouge –Auzeville – CS52627
31326 Castanet Tolosan CEDEX - France

Dernière mise à jour : Mai 2018

Menu Logo Principal Institut Agro Rennes-Angers Angers University   IRHS



  • Abadie C, Lothier J, Boex-Fontvieille E, Carroll A, Tcherkez G. 2017. Direct assessment of the metabolic origin of carbon atoms in glutamate from illuminated leaves using 13 C-NMR. New Phytologist. Epub ahead of print.
  • Ahmadi-Afzadi M, Orsel M, Pelletier S, Bruneau M, Proux-Wéra E, Nybom H., Renou JP. 2017. Genome-wide expression analysis suggests a role for jasmonates in the resistance to blue mold in apple.. Plant Growth Regulation. Accepted Nov 2017..
  • Ayad D, Leclerc S, Hamon B, Kedad A, Bouznad Z, Simoneau P 2017. First report of early blight caused by Alternaria protenta on potato in Algeria. Plant Disease. 101(5): 836.
  • Baïram, E., Delaire, M., Le Morvan, C., & Buck-Sorlin, G. 2017. Models for Predicting the Architecture of Different Shoot Types in Apple. . Frontiers in plant science. 8, 65.
  • Bastide F., I. Sérandat, J. Gombert, E. Laurent, E. Morel, J. Kolopp, P.L. Guillermin, B. Hamon, P. Simoneau, R. Berruyer, P. Poupard 2017. Characterization of fungal pathogens (Diaporthe angelicae and D. eres) responsible for umbel browning and stem necrosis on carrot in France . Plant Pathology. 66: 239-253. doi:10.1111/ppa.12570
  • Bessadat N.,  Berruyer R., Hamon B., Bataillé-Simoneau N., Benichou S., Kihal M., Henni D.E., Simoneau P. 2017. Alternaria species associated with early blight epidemics on tomato and other Solanaceae crops in northwestern Algeria. Eur. J. Plant Pathol.. 148:181-197. DOI: 10.1007/s10658-016-1081-9
  • Cañas RA., Yesbergenova-Cuny Z., Simons M., Chardon F., Armengaud P., Quilleré I., Cukier C., Gibon Y., Limami AM., Nicolas SD., Brulé L., Lea PJ., Maranas CD., Hirel B. 2017. Exploiting the genetic diversity of maize using a combined metabolomic, enzyme activity profiling, and metabolic modelling approach to link leaf physiology to kernel yield . Plant Cell. 29: 919-943.
  • Castella C., Mirtziou I., Seassau A., Boscari A., Montrichard F., Papadopoulou K., Rouhier N., Puppo A., Brouquisse R. 2017. Post-translational modifications of Medicago truncatula glutathione peroxidase 1 induced by nitric oxide. Nitric Oxide. 68: 125-136.
  • Chaumont L., Malécot V., Pymar R., Sbai C. 2017. Reconstructing pedigrees using probabilistic analysis of ISSR amplification.. Journal of Theoretical Biology. 412 : 8-16
  • Corot A, Roman H, Douillet O, Autret H, Perez-Garcia M-D, Citerne S, Bertheloot J, Sakr S, Leduc N and Demotes-Mainard S 2017. Cytokinins and Abscisic Acid Act Antagonistically in the Regulation of the Bud Outgrowth Pattern by Light Intensity.. Frontiers in Plant Science. 8: 1724.
  • Daccord N., Celton J.M., Linsmith G., Becker C., Choisne N., Schijlen E., van de Geest H., Bianco L., Micheletti D., Velasco R., Adele Di Pierro E., Gouzy J., Rees J.G., Guérif P., Muranty H., Durel C.E., Laurens F., Lespinasse Y., Gaillard S., Aubourg S., Quesneville H., Weigel D., van de Weg E., Troggio M.,  Bucher E. 2017. High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nature Genetics. 49: 1099 - 1106. . doi:10.1038/ng.3886
  • Darrasse A, Barret M,  Cesbron S, Compant S, Jacques M-A 2017. Niches and routes of transmission of Xanthomonas citri pv. Fuscans to bean seeds. Plant & Soil. . DOI 10.1007/s11104-017-3329-3
  • Denance N, Legendre B, Briand M, Olivier V, de BoissesonC, Poliakoff F, Jacques M-A.  2017. Several subspecies and sequence types are associated with the emergence of Xylella fastidiosa in natural settings in France.. Plant Pathology . 66:1054–1064. 10.1111/ppa.12695
  • Duvaux, L., Shiller, J., Vandeputte, P., Dugé de Bernonville, T., Thornton, C., Papon, N., Le Cam B, Bouchara JP, Gastebois, A. (2017).  Genome Announcements, 5(37), e00871–17. 2017. Draft Genome Sequence of the Human-Pathogenic Fungus Scedosporium boydii.. Genome announcement.  5.37  e00871–17.
  • Escobar Rodriguez C, Mitter B, Barret M, Sessitsch A, Compant S 2017. Commentary : seed bacterial inhabitants and their routes of colonization. Plant & Soil. . DOI 10.1007/s11104-017-3368-9
  • Gangappa SN, Berriri, S, Kumar SV 2017. PIF4 Coordinates Thermosensory Growth and Immunity in Arabidopsis. Current Biology. 27: 243-249.
  • Genot B, Lang J, Berriri S, Garnier M, Gilard F, Pateyron S, Haustraete K, Van der Straeten D, Hirt H, Colcombet J 2017. Constitutively active Arabidopsis MAP Kinase 3 triggers defense responses involving salicylic acid and SUMM2 resistance protein. Plant Physiology. 174: 1238-1249.
  • Goyet V, Billard E, Pouvreau JB, Lechat MM, Pelletier S, Bahut M, Monteau F, Spíchal L, Delavault P, Montiel G, Simier P. (2017) Haustorium initiation in the obligate parasitic plant Phelipanche ramosa involves a host-exudated cytokinin signal. J Exp Bot. 68(20):5539-5552.
  • José R. Hernández Mora, Diego Micheletti, Marco Bink, Eric Van de Weg, Celia Cantín, Nelson Nazzicari, Andrea Caprera, Maria Teresa Dettori, Sabrina Micali, Elisa Banchi, José Antonio Campoy, Elisabeth Dirlewanger, Patrick Lambert, Thierry Pascal, Michela Troggio, Daniele Bassi, Laura Rossini, Ignazio Verde, Bénédicte Quilot-Turion, François Laurens, Pere Arús and Maria José Aranzana 2017. Integrated QTL detection for key breeding traits in multiple peach progenies. BMC Genomics . BMC Genomics 2017; 18, 404. . doi: 10.1186/s12864-017-3783-6
  • Le Guillou-Guillemette H, Pivert A, Bouthry E, Henquell C, Petsaris O, Ducancelle A, …Lemaire C. 2017. Natural non-homologous recombination led to the emergence of a duplicated V3-NS5A region in HCV-1b strains associated with hepatocellular carcinoma. Plos one . 12(4): e0174651.
  • Le Signor C, Aime D, Bordat A, Belghazi M, Labas V, Gouzy J, Young ND, Prosperi JM, Leprince O, Thompson RD, Buitink J, Burstin J, Gallardo K 2017. Genome-wide association studies with proteomics data reveal genes important for synthesis, transport and packaging of globulins in legume seeds. New Phytologist. 214: 1597-1613.
  • Legume Phylogeny Working Group (Azani M., Babineau M., Bailey C.D., Banks H., Barbosa A.R., Barbosa Pinto R., Boatwright J.S., Borges L.M., Brown G.K., Bruneau A., Candido E., Cardoso D., Chung K.-F., Clark R.P., Conceição A. de S., Crisp M., Cubas P., Delgado-Salinas A., Dexter K.G., Doyle J.J., Duminil J., Egan A.N., Estrella M. de la, Falcão M.J., Filatov D.A., Fortuna-Perez A.P., Fortunato R.H., Gagnon E., Gasson P., Gastaldello Rando J., Goulart de Azevedo Tozzi A.M., Gunn B., Harris D., Haston E., Hawkins J.A., Herendeen P.S., Hughes C.E., Iganci J.R.V., Javadi F., Kanu S.A., Kazempour-Osaloo S., Kite G.C., Klitgaard B.B., Kochanovski F.J., Koenen E.J.M., Kovar L., Lavin M., le Roux M., Lewis G.P., Lima H.C. de, López-Roberts M.C., Mackinder B., Maia V.H., Malécot V., Mansano V.F., Marazzi B., Mattapha S., Miller J.T., Mitsuyuki C., Moura T., Murphy D.J., Nageswara-Rao M., Nevado B., Neves D., Ojeda D.I., Pennington R.T., Prado D.E., Prenner G., Queiroz L.P. de, Ramos G., Ranzato Filardi F.L., Ribeiro P.G., Rico-Arce M. de L., Sanderson M.J., Santos-Silva J., São-Mateus W.M.B., Silva M.J.S., Simon M.F., Sinou C., Snak C., Souza E.R. de, Sprent J., Steele K.P., Steier J.E., Steeves R., Stirton C.H., Tagane S., Torke B.M., Toyama H., Trabuco da Cruz D., Vatanparast M., Wieringa J.J., Wink M., Wojciechowski M.F., Yahara T., Yi T., Zimmerman E.) 2017. A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny. Taxon. 66(1) : 44-77. doi:10.12705/661.3.
  • Lima JJP, Buitink J, Lalanne D, Rossi RF, Pelletier S, da Sivla EAA, Leprince 0 2017. Molecular characterization of the acquisition of longevity during seed maturation in soybean12: e0180282. Plos One. 12: e0180282.
  • Marolleau B, Gaucher M, Heintz C., Degrave A, Warneys R, Orain G., Lemarquand A, Brisset MN  2017. When a plant resistance inducer leaves the lab for the field: Integrating ASM into routine apple protection practices. Frontiers in Plant Science. 8:1938. DOI: 10.3389/fpls.2017.01938
  • Merda D, Briand M, Bosis E, Rousseau C, Portier P, Barret M, Jacques M-A, Fischer-Le Saux M 2017. Ancestral acquisitions, gene flow and multiple evolutionary trajectories of the type three secretion system and effectors in Xanthomonas plant pathogens. Molecular Ecology. 26:5939-5952. doi: 10.1111/mec.14343
  • Moriya S., Kunihisa M., Okada K., Shimizu T., Honda C., Yamamoto T., Muranty H., Denancé C., Katayose Y., Iwata H., Abe  K. 2017. Allelic composition of MdMYB1 drives red skin color intensity in apple (Malus × domestica Borkh.) and its application to breeding. Euphytica. 213:78..  doi: 10.1007/s10681-017-1864-x
  • Osdaghi E., Forero-Serna N., Bolot S., Fisher-Le Saux M., Jacques M-A., Portier P., Carrère S. And Koebnik R. 2017. High-quality draft genome sequence of Curtobacterium sp. strain Ferrero. Genome Announc. 5 (48) e01378-17 . 10.1128/genomeA.01378-17
  • Paszkiewicz G, Gualberto JM, Benamar A,   Macherel D, Logan DC, 2017. Arabidopsis seed mitochondria are bioenergetically active immediately upon imbibition and specialize via biogenesis in preparation for autotrophic growth. Plant Cell. 29, 109-128.
  • Pateau V, Razafimandimby B, Vandeputte P, Thornton CR, Guillemette T, Bouchara JP, Giraud S 2017. Gene Disruption in Scedosporium aurantiacum: Proof of Concept with the Disruption of SODC Gene Encoding a Cytosolic Cu,Zn-Superoxide Dismutase. Mycopathologia. . DOI 10.1007/s11046-017-0204-y
  • Pazhamala L. T., Purohit, S., Saxena, R. K., Garg, V., Krishnamurthy, L., Verdier, J., & Varshney, R. K. 2017. Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation. Journal of Experimental Botany. 68: 2037-2054.
  • Pellizzaro A., Alibert B., Planchet E., Limami AM., Morère-Le Paven MC 2017. Nitrate transporters : an overview in legumes. Planta. 25 585-595.
  • Péron T, Candat A, Montiel G, Veronesi C, Macherel D, Delavault P, Simier P 2017. New Insights into Phloem Unloading and Expression of Sucrose Transporters in Vegetative Sinks of the Parasitic Plant Phelipanche ramosa L. (Pomei). Frontiers in Plant Science. 7, 2048.
  • Perrin F., Dubois-Laurent C., Gibon Y., Citerne S., Huet S., Suel A., Le Clerc L., Briard M., Hamama L., Peltier D., Gagné S., Geoffriau E. 2017. Combined Alternaria dauci infection and water stresses impact carotenoid content of carrot leaves and roots. . Environmental and Experimental Botany . 143:125-134 . DOI: 10.1016/j.envexpbot.2017.09.004 available online 9 sept 2017
  • Perrin F., Hartmann L., Dubois-Laurent C., Welsch R., Huet S., Hamama L., Briard M., Peltier D., Gagné S., Geoffriau E. 2017. Carotenoid gene expression explains the difference of carotenoid accumulation in carrot root tissues. . Planta . 254(4):737-747 . DOI: 10.1007/s00425-016-2637-9
  • Pigné S, Zykwinska A, Janod E, Cuenot S, Kerkoud M, Raulo R, Bataillé-Simoneau N, Marchi M, Kwasiborski A, N’Guyen G, Mabilleau G, Simoneau P, Guillemette T 2017. A flavoprotein supports cell wall properties in the necrotrophic fungus Alternaria brassicicola. Fungal Biology and Biotechnology. 4:1-13.
  • Pilet-Nayel M.L., Moury B., Caffier V., Montarry J., Kerlan M.C., Fournet S., Durel C.E., Delourme R. 2017. Quantitative resistance to plant pathogens in pyramiding strategies for durable crop protection. Frontiers in Plant Science. 8:1838 . DOI: 10.3389/fpls.2017.01838
  • Pilet-Nayel ML, Moury B, Caffier V, Montarry J, Kerlan MC, Fournet S, Durel CE, Delourme R 2017. Quantitative resistance to plant pathogens in pyramiding strategies for durable crop protection. Frontiers in Plant Science. 8: 1838.
  • Raveneau MP, Benamar A, Macherel D 2017. Water content, adenylate kinase, and mitochondria drive adenylate balance in dehydrating and imbibing seeds. Journal Experimental Botany. 68: 3501-3512.
  • Rezki S, Campion C, Simoneau P, Jacques M-A, Shade A, Barret M 2017. Assembly of seed-associated microbial communities
  • within and across successive plant generations. Plant & Soil. . 10.1007/s11104-017-3451-2
  • Richard D., Boyer C., Lefeuvre P., Canteros B.I., Beni-Madhu S., Portier P., Pruvost O. 2017. Complete Genome Sequences of Six Copper-Resistant Xanthomonas Strains Causing Bacterial Spot of Solaneous Plants, Belonging to X. gardneri, X. euvesicatoria, and X. vesicatoria, Using Long-Read Technology. Genome Announc. 5 (8) . 10.1128/genomeA.01693-16
  • Richards, C. L., Alonso, C., Becker, C., Bossdorf, O., Bucher, E., Colomé-Tatché, M., … Verhoeven, K. J. F. 2017. Ecological plant epigenetics: Evidence from model and non-model species, and the way forward.. Ecology Letters. 20(12), 1576-1590.
  • Roman, H., Girault, T., Le Gourrierec, J., Leduc, N. 2017. In silico analysis of 3 expansin gene promoters reveals 2 hubs controlling light and cytokinin response during bud outgrowth. Plant Signaling and Behaviour. 12(2): ---.
  • Ruh M., Briand M., Bonneau S., Jacques M-A., Chen NWG. 2017. Xanthomonas adaptation to common bean is associated with horizontal transfers of genes encoding TAL effectors. BMC Genomics . 18:670. DOI 10.1186/s12864-017-4087-6
  • Ruh M., Briand M., Bonneau S., Jacques M-A., Chen NWG. 2017. First Complete Genome Sequences of Xanthomonas citri pv. vignicola Strains CFBP7111, CFBP7112, and CFBP7113 Obtained Using Long-Read Technology. Genome Announcements. 5:e00813-17. doi: 10.1128/genomeA.00813-17
  • Shade A, Jacques M-A, Barret 2017. Ecological patterns of seed microbiome diversity, transmission, and assembly. Current Opinion in Microbiology. 37:15–22. "
  • Thapa SP, Pattathil S, Hahn MG, Jacques M-A, Gilbertson RL, Coaker G. 2017. Comparative genomic analysis of Clavibacter michiganensis reveals insight into virulence strategies of Gram-positive bacterial pathogens.. Molecular Plant Pathology Interactions . 30:786–802..
  • Thieme M., S. Lanciano, S. Balzergue, N. Daccord, M. Mirouze and E. Bucher 2017. Inhibition of RNA polymerase II allows controlled mobilisation of retrotransposons for plant breeding.. Genome Biology. 18(1):134.
  • Tian, T., Wu, L., Henke, M., Ali, B., Zhou, W., & Buck-Sorlin, G. 2017. Modeling allometric relationships in leaves of young rapeseed (Brassica napus L.) grown at different temperature treatments.. Frontiers in plant science. 8, 313.
  • Urrestarazu J, Muranty H, Denancé C, Leforestier D, Ravon E, Guyader A, Guisnel R, Feugey L, Aubourg S, Celton JM, Daccord N, Dondini L, Gregori R, Lateur M, Houben P, Ordidge M, Paprstein F, Sedlak J, Nybom H, Garkava- Gustavson L, Troggio M, Bianco L, Velasco R, Poncet C, Theron A, Moriya S, Bink MCAM, Laurens F, Tartarini S, Durel CE  2017. Genome-wide association mapping of flowering and ripening periods in apple. Frontiers in Plant Science. 8:1923. DOI: 10.3389/fpls.2017.01923
  • Wakim J, Goudenege D, Perrot R, Gueguen N, Desquiret-Dumas V, de la Barca JMC, Rosa ID, Manero F,Le Mao M, Chupin S, Chevrollier A, Procaccio V, Bonneau D, Logan DC, Reynier P, Lenaers G, Khiati S 2017. CLUH couples mitochondrial distribution to the energetic and metabolic status. J Cell Science. 130: 1940-1951.
  • Werner Ribeiro C., Baldacci-Cresp F., Pierre O., Larousse M., Benyamina S., Lambert A., Hopkins J., Castella C., Cazareth J., Alloing G., Boncompagni E., Couturier J., Mergaert P., Gamas P., Rouhier N., Montrichard F., Frendo P. 2017. Regulation of differentiation of nitrogen-fixing bacteria by microsymbiont targeting of plant thioredoxin s1. Current Biology. 27: 1-7.
  • Dall’Agata M, Pagliarani G, Padmarasu S, Troggio M, Bianco L, Dapena E, Miñarro M, Aubourg S, Lespinasse Y, Durel C-E, Tartarini S 2018. Identification of candidate genes at the Dp-fl locus conferring resistance against the rosy apple aphid Dysaphis plantaginea. Tree Genetics & Genomes. in press.
  • Henke M., Buck-Sorlin GH 2018. Using a full spectral raytracer for calculating light microclimate in functional-structural plant modelling. Computing and Informatics. 36, 1001.
  • van de Weg E., Mario Di GuardoMelanie JänschDidier Socquet-JuglardFabrizio CostaIsabelle BaumgartnerGiovanni A. L. BrogginiMarkus KellerhalsMichela TroggioFrançois LaurensCharles-Eric DurelAndrea Patocchi 2018. Epistatic fire blight resistance QTL alleles  in the apple cultivar 'Enterprise' and selection X-6398 discovered and characterized through pedigree-informed analysis. Mol Breeding. Mol Breeding 38.5 . doi: 10.1007/s11032-017-0755-0